Journal club meetings are on Mondays at 2-3 pm through video conference.
Yiming Jin, Linux O. Johannissen, Sam Hay: Prediction new protein conformations from molecular dynamics simulation conformational landscapes and machine learning. Proteins (2021)
presented by Michael
Rao R, Liu J, Verkuil R, Meier J, Canny JF, Abbeel P, et al. MSA Transformer. bioRxiv. 2021.
presented by Lim
Norn et al., (2021) PNAS
Presented by Giacomo
Fanalista, F., Deshpande, S., Lau, A., Pawlik, G., & Dekker, C. (2018). Advanced Biosystems, 2(9), 1800136. https://doi.org/10.1002/adbi.201800136
presented by Gilberto
Carroll, E.C., Latorraca, N.R., Lindner, J.M., Maguire, B.C., Pelton, J.G., and Marqusee, S. Proc. Natl. Acad. Sci. U.S.A. (2021).
presented by Lim
Raich et al., (2021) PNAS
Presented by Giacomo
Boeynaems, S., Holehouse, A. S., Weinhardt, V., et al. (2019). PNAS, 116(16), 7889–7898. https://doi.org/10.1073/pnas.1821038116
presented by Gilberto
Matsumoto et al., Nature Machine Intelligence (2021).
presented by Lim
Gainza et al., (2020) Nature Methods
Presented by Giacomo
Ukmar-Godec, T., Hutten, S., Grieshop, M.P. et al. Nat Commun 10, 2909 (2019) https://doi.org/10.1038/s41467-019-10792-y
presented by Gilberto
Thomas et al., arXiv (2018).
presented by Lim
Xiaoyang Jing and Jinbo Xu (2020) bioRxiv,
Sanders, D. W., et al (2020) Cell, 181(2), 306-324.e28, doi.org/10.1016/j.cell.2020.03.050
presented by Gilberto
Braberg et al., Science (2020).
presented by Lim
Zheng, W., et al. (2020). JPC B, acs.jpcb.0c10489
presented by Gilberto
W. S. Tang, N. L. Fawzi, and J. Mittal
J. Phys. Chem. B 2020, 124, 9505−9512
presented by Bercem
Iserte, J.A., et al., Scientific reports (2020).
presented by Lim
Alshareedah, I. et al. PNAS, 117, 15650–15658 (2020)
presented by Gilberto
S. Peng, W. Li, Y. Yao, W. Xing, P. Li, and C. Chen
presented by Bercem
Anonymous authors, Under review as a conference paper at ICLR 2021.
presented by Lim