Biochemistry and Molecular Biology
2021 | ||
6. | Bercem Dutagaci, Grzegorz Nawrocki, Joyce Goodluck, Ali Akbar Ashkarran, Charles G. Hoogstraten, Lisa J. Lapidus, Michael Feig: Charge-driven condensation of RNA and proteins suggests broad role of phase separation in cytoplasmic environments eLife (2021) 10, e64004 Abstract PDF | |
2019 | ||
5. | Stephanie A. Brocke, Alexandra Degen, Alexander D. MacKerell Jr., Bercem Dutagaci, Michael Feig: Prediction of Membrane Permeation of Drug Molecules by Combining an Implicit Membrane Model with Machine Learning Journal of Chemical Information and Modeling (2019) 59, 1147-1162 Abstract PDF | |
2018 | ||
4. | Bercem Dutagaci, Lim Heo, Michael Feig: Structure Refinement of Membrane Proteins via Molecular Dynamics Simulations Proteins (2018) 86, 738-750 Abstract PDF | |
2017 | ||
3. | Bercem Dutagaci, Michael Feig: Determination of Hydrophobic Lengths of Membrane Proteins with the HDGB Implicit Membrane Model Journal of Chemical Information and Modeling (2017) 57, 3032-3042 Abstract PDF | |
2. | Bercem Dutagaci, Kitiyaporn Wittayanarakul, Takaharu Mori, Michael Feig: Discrimination of Native-like States of Membrane Proteins with Implicit Membrane-Based Scoring Functions Journal of Chemical Theory and Computation (2017) 13, 3049-3059 Abstract PDF | |
1. | Bercem Dutagaci, Maryam Sayadi, Michael Feig: Heterogeneous dielectric generalized Born model with a van der Waals term provides improved association energetics of membrane-embedded transmembrane helices Journal of Computational Chemistry (2017) 38, 1308-1320 Abstract PDF |