Hydrophobic length of membrane protein structure

Estimate of optimal hydrophobic width of lipid bilayer for a given membrane protein structure.

B. Dutagaci, M. Feig: Journal of Chemical Information and Modeling (2017)

Input: A PDB file containing a membrane protein structure decoys (max. 1000 residues). The structure does not need to be oriented with respect to the membrane.

Output: Optimally oriented PDB file and estimated hydrophobic width.

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