Computational biochemistry is very computer-intensive research. We use a variety of different computer systems, from desktop workstations to parallel clusters. All computers run variants of the Linux operating system.
Ganglia pages of lab resources. Availability of storage resources.
All workstations have Intel CPUs and run Linux.
| pbpier | 2x12core Intel E5-2670 v3 2.3 GHz, 128 GB, Quadro M5000 | Bercem (BCH 218) |
| windansea | 2x12core Intel E5-2670 v3 2.3 GHz, 128 GB, Quadro M5000 | Lim (BCH 220) |
| pipes | 2x8core Intel E5-2665, 2.4 GHz, 64 GB, Quadro K2000 | Collin (BCH 220) |
| grandview | 2x6core Intel E5-2630 2.3 GHz, 96 GB, Quadro 600 | Gilberto (BCH 220) |
| theshores | 2x6core Intel E5-2620 2.0 GHz, 64 GB, Quadro 600 | Michael (BCH 218A) |
| pinkN (greenc39-greenc43) | 2x8core Intel E5-2680 2.7 GHz, 32 GB | 1-5 | |
| pink6 (greenc44) |
|
6 | |
| redNN | 2x6core Intel X5650 2.66 GHz, 12 GB | 1-10 | |
| yellowN (greenc29-greenc32) | 2x12core Intel E5-2680 v3 2.5 GHz, 64 GB, 1xK40m,1xGTX 980 Ti | 1-4 | |
| greenN (greenc01-greenc06) | 2x6core Intel E5-2620 v3 2.4 GHz, 32 GB, 2xGTX 980Ti | 1-6 | |
| greenN(greenc07-greenc11) | 2x14core Intel E5-2683 v3 2.0 GHz, 64 GB, 2xGTX 1080 | 7-11 | |
| greenN(greenc12-greenc14) | 2x14core Intel E5-2683 v3 2.0 GHz, 64 GB, 2xGTX 1080 Ti | 12-14 |
Storage servers are greensX and other lab servers are blueX. As a general rule calculations should not be run on these machines.
| greens1 | 2x6core Intel E5-2630v2 2.6 GHz, 32 GB, 60 TB | storage for active projects |
| greens2 | 2x8core Intel E5-2630v3 2.4 GHz, 32 GB, 80 TB | storage for active projects |
| greens4 | 2x6core Intel E5-2620v3 2.4 GHz, 16 GB, 60 TB | storage for active projects |
| greens5 | 2x4core Intel X5550 2.66 GHz, 16 GB, 36 TB | archival storage |
| greens6 | 2x4core Intel E5-2609 2.40 GHz, 16 GB, 12 TB | storage for active projects |
| blue1 | 2x8core Intel E5-2680 2.7 GHz, 32 GB | main lab server, web, wiki etc. |
| blue4 | 2x Xeon 2.8 GHz, 4 GB, 32 bit | daily backup |
| blue5 | 2x8core Intel E5-2609 v4 1.7 GHz, 32 GB, 1.4/4 TB | home directories |
| blue6 | 2x4core Intel E5620 2.4 GHz, 12 GB, 2 TB | web service |
| blue7 | 2x Intel Xeon 3.4 GHz, 2 GB, 4 TB | locPREFMD/PREFMD web service |
| blue8 | 2x Xeon 2.8 GHz, 4 GB, 32 bit | web service |
| blue9 | 2x4core Intel E5405 2.0 GHz, 16 GB | web service |
| feigstore | 2x4core Intel E5420 2.5 GHz, 8 GB, 10 TB | secondary backup |