Bercem Dutagaci

Bercem Dutagaci

Postdoctoral Research Associate

Biochemistry and Molecular Biology

 

Contact:

bercemdutagaci@gmail.com

+1-517-353-6743

Publications:

2019
  5. Stephanie A. Brocke, Alexandra Degen, Alexander D. MacKerell Jr., Bercem Dutagaci, Michael Feig: Prediction of Membrane Permeation of Drug Molecules by Combining an Implicit Membrane Model with Machine Learning Journal of Chemical Information and Modeling (2019) 59, 1147-1162 Abstract PDF
2018
  4. Bercem Dutagaci, Lim Heo, Michael Feig: Structure Refinement of Membrane Proteins via Molecular Dynamics Simulations Proteins (2018) 86, 738-750 Abstract PDF
2017
  3. Bercem Dutagaci, Michael Feig: Determination of Hydrophobic Lengths of Membrane Proteins with the HDGB Implicit Membrane Model Journal of Chemical Information and Modeling (2017) 57, 3032-3042 Abstract PDF
  2. Bercem Dutagaci, Kitiyaporn Wittayanarakul, Takaharu Mori, Michael Feig: Discrimination of Native-like States of Membrane Proteins with Implicit Membrane-Based Scoring Functions Journal of Chemical Theory and Computation (2017) 13, 3049-3059 Abstract PDF
  1. Bercem Dutagaci, Maryam Sayadi, Michael Feig: Heterogeneous dielectric generalized Born model with a van der Waals term provides improved association energetics of membrane-embedded transmembrane helices Journal of Computational Chemistry (2017) 38, 1308-1320 Abstract PDF