Difference between revisions of "rgyr.pl"

Latest revision as of 01:46, 28 July 2009

usage: rgyr.pl -cofm x y z -caonly [pdbFile]

This script calculates the radius of gyration in Ångstrom for a given structure.

-help: usage information
-caonly: use only C-alpha atoms for calculating the radius of gyration (otherwise all non-hydrogen atoms are used)

rgyr.pl 1vii.exp.pdb
determines the radius of gyration

9.389212

rgyr.pl -caonly 1vii.exp.pdb
determines the radius of gyration basd on C-alpha atoms

8.817567

Revision as of 01:45, 28 July 2009 (view source) Edit (talk \| contribs) (→‎Options) ← Previous diff		Latest revision as of 01:46, 28 July 2009 (view source) Edit (talk \| contribs) (→‎Examples)
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	<mmtsbToolExample cmd="rgyr.pl" set="/apps/mmtsb/bench/rgyr.pl-test/test1"></mmtsbToolExample>		<mmtsbToolExample cmd="rgyr.pl" set="/apps/mmtsb/bench/rgyr.pl-test/test1"></mmtsbToolExample>
		+
		+	<mmtsbToolExample cmd="rgyr.pl" set="/apps/mmtsb/bench/rgyr.pl-test/test2"></mmtsbToolExample>