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Main Page
Contents
Structure preparation
convpdb.pl complete.pl mutate.pl mutateNA.pl
Structure analysis
centerOfMass.pl cluster.pl contact.pl countIntCont.pl dihed.pl lsqfit.pl mindist.pl
All-Atom Modeling
enerAmber.pl enerCHARMM.pl analyzeCHARMM.pl equiCHARMM.pl genPSF.pl mdAmber.pl mdCHARMM.pl minAmber.pl minCHARMM.pl nmaCHARMM.pl pbCHARMM.pl pdb2traj.pl processDCD.pl
Structure Prediction
buildModel.pl
Ensemble Computing
bestcluster.pl calcprop.pl checkin.pl enscluster.pl enscut.pl enseval.pl ensfiles.pl enslatsim.pl ensmin.pl ensrun.pl getprop.pl
Replica Exchange Sampling
aarex.pl aarexAmaber.pl latrex.pl gorex.pl hlamcrex.pl
SICHO Lattice Modeling
genchain.pl geninput.pl checkchain.pl genrestr.pl genseq.pl hlamc.pl latticeener.pl latticesim.pl
jobserver.pl
psiblast.pl
psipred.pl
qscore.pl
readArchive.pl
rebuild.pl
rexanalysis.pl
rexinfo.pl
rexserver.pl
rgyr.pl
rms.pl
scalarCHARMM.pl
setprop.pl
showcluster.pl
vicinity.pl
writeArchive.pl
xtracttra.pl