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Difference between revisions of "mindist.pl"
From MMTSB
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a pair of residues in a protein structure. The residue numbers and | a pair of residues in a protein structure. The residue numbers and | ||
the protein structure are expected as command line arguments. | the protein structure are expected as command line arguments. | ||
| − | The distance in | + | The distance in Ångstrom is written to standard output. |
| + | |||
== Options == | == Options == | ||
Latest revision as of 02:35, 28 July 2009
Usage
usage: mindist.pl residue1 residue2 pdbFile
Description
This script calculates the minimum distance of heavy atoms between a pair of residues in a protein structure. The residue numbers and the protein structure are expected as command line arguments. The distance in Ångstrom is written to standard output.
Options
- -help
- usage information
Examples
mindist.pl 10 18 1vii.exp.pdb
calculates the minimum inter-residue distance for the given residue
pair in the given structure
7.905990